CDS

Accession Number TCMCG006C46994
gbkey CDS
Protein Id XP_013735784.2
Location complement(join(21537100..21537126,21537251..21537503,21537581..21537649,21537739..21537776,21537879..21537939,21538027..21538094,21538226..21538401,21538497..21538561,21538672..21538745,21538833..21538936,21539055..21539157,21539244..21539331,21539450..21539512,21539585..21539664,21539746..21539802,21539889..21539961,21540043..21540251,21540347..21540547,21540643..21540724,21540895..21541097))
Gene LOC106438997
GeneID 106438997
Organism Brassica napus

Protein

Length 697aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013880330.2
Definition multisubstrate pseudouridine synthase 7-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category S
Description Pseudouridine synthase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
KEGG_ko ko:K06176        [VIEW IN KEGG]
EC 5.4.99.27        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000154        [VIEW IN EMBL-EBI]
GO:0000455        [VIEW IN EMBL-EBI]
GO:0001522        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005732        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006400        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008033        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009982        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0016073        [VIEW IN EMBL-EBI]
GO:0016556        [VIEW IN EMBL-EBI]
GO:0016853        [VIEW IN EMBL-EBI]
GO:0016866        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0031118        [VIEW IN EMBL-EBI]
GO:0031119        [VIEW IN EMBL-EBI]
GO:0031120        [VIEW IN EMBL-EBI]
GO:0031429        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0040031        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044452        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0072588        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990481        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAAGGCAATGAAACTAAACAAAACTGTTTCGTCTTGTTTGTTGCGTCTGCTAAAACCCTACTCCTCGAGCTTTCACTGGACTTCGACAATGGCGGCGTCAGCTAAAACCTCCGAGGGTATGAAGACCGTAGATGAATCCGACGTGGGCATCTCCTGTTTCATCTCCCAGCTCCCTGGCTTCCGCGGGATTCTCAAACAAAGATACGCAGACTTTATTGTAAACGAAGTGGATATGGATGGCAATGTTGTTCGTTTGACATCACTGGATGTCTCTCCTGAGATGGATGTGAAGGAGGAAGATAAAACGAAAAGTTCAGATGATGTACCACAAAGCTATGCTTCTGCAATTGAATCCTTCAGATCTCTTTGCAGTGCCTCTGATGCAGAGCGTATGGAAACTTTGGTTAATCAAGTCACTTCAGGAGCTGATGATGAGATCTCGCCGGTTGTTCTTGATCCAAGTTCTGACAAGTCCAAGAGAACGGCGATCCACAACTTTGTTAAAGAAAAATTCAAGTTTCTAGTGACCGACACGGTAGATGGTCCAGATCCTACTTCGAAATGCATCCGTGTGCGAGTTAATTCAGGAAACGCTGGAGGTAAAAGATCGAGAAAGCGGAAGGAGAGAGGTGATAAGCCGTTTGATAGCAGAGGTTCAGAGCATTGGCCAGCGGATGTTGGCAAGTTTCTCAAGTTCCATCTCTACAAGGAGAACAAAGATACACAAGAGGCCTTGGGATTGATAGGAAAGATGCTTGGCGTTCAGCCAAAGTCGTTCGGATTCTCTGGAACAAAGGATAAGCGATCAGTCTCAACTCAACGTGTAACTGTGTTCAAACAGCAAGCTAGCAAATTGGCTGCGCTTAACAAGAGATTGTTTGGGATCAAAGTTGGTGACTTCAGCCTTGTAAAAGAGGGCCTTCTCCTTGGGCAGCTGATGGGAAACAGATTTACAATCACATTGAGAGGAGTGGTTGCAGATTCTGAAGAAACTATCAAAAAGTCTGCAGAATCCTTGGGCAAAGATGGCTTCATCAACTACTTTGGCTTGCAGCGTTTTGGAAGTGGTTCAGTACCAACCCACCATGTTGGAGCCGCACTACTGAAAGGAGAGTGGAAAGAAGCTGTAGACATGATTCTTGATCCAAGAGAAAGTGAAAGGAATGTAGTAAACGAGGCCCGGGAATATTACAAAGAAACTGGAGATATTGACGGGACTCTAAGGCAGCTACCGCGATACCTCGTTGCTGAAAGAGCCATTCTGCAGTGTCTGAAGAAATGTCCTGGGAACTACCTGCAGGCTCTGAAAGGCATACCCAGAACTTTGAGAATGATGTATGTACATAGTTATCAGAGCTACTTATGGAACAATGCAGCAAGTCTGCGCGTGCAAAAATACGGGAACAACCAAGTTGTGTTGGGGGACTTGGTAAGTACAAAGGTAGAGGATGCAAAGAGAATCGTTGGCAGTTTGAACTCTGAACAGAAGGAAAACAGTGAAGAGGCATTGGACTGTGACCAGTTAGATGATACTGCTGTTGTTGATCTTCCAGGAGAAAGGAGTGACCTCGTTAAGGTTGTAGGTAAAGAAGACGTGGAAGCTGAAACTTACTCTACCAGTGACATCGTCCTCCCTCTACCTGGCTCCAGAGTTATTTATCCGTCCAATGACGTTGCTGAAATTTTTCATGATTTGGCAAAGAAGGACGGTATCAGCCTAACAGAGAGCATTCACGGTGTAAAGGAATTCTCAATAACTAGCATGACTGGTGGTTATAGACGTGTTTTCCAGAAGCCAATTGACTTTGAATGGGAGTTACTGACTTACACTGACAGCAATAAACCATTGGCAGAGACGGACCTGGACAGGATAACCATGGAAAAGCCAGTGGACAAAGTTGGATCCGCTGAAGAAACTGAATCCGATAGCAACCAACCAGAATCATGTGAAACCGATTTGAAAGATTCCGAGCAGACACAGTTGGCTCTCAAAATGGCTCTCACTCTTCCATCTTCTTGTTATGCAACAATGGCAATCAGAGAGCTCTTGAAGACGTCAACTTCTGTTGCATATCACAAGACACTAAACTAG
Protein:  
MKAMKLNKTVSSCLLRLLKPYSSSFHWTSTMAASAKTSEGMKTVDESDVGISCFISQLPGFRGILKQRYADFIVNEVDMDGNVVRLTSLDVSPEMDVKEEDKTKSSDDVPQSYASAIESFRSLCSASDAERMETLVNQVTSGADDEISPVVLDPSSDKSKRTAIHNFVKEKFKFLVTDTVDGPDPTSKCIRVRVNSGNAGGKRSRKRKERGDKPFDSRGSEHWPADVGKFLKFHLYKENKDTQEALGLIGKMLGVQPKSFGFSGTKDKRSVSTQRVTVFKQQASKLAALNKRLFGIKVGDFSLVKEGLLLGQLMGNRFTITLRGVVADSEETIKKSAESLGKDGFINYFGLQRFGSGSVPTHHVGAALLKGEWKEAVDMILDPRESERNVVNEAREYYKETGDIDGTLRQLPRYLVAERAILQCLKKCPGNYLQALKGIPRTLRMMYVHSYQSYLWNNAASLRVQKYGNNQVVLGDLVSTKVEDAKRIVGSLNSEQKENSEEALDCDQLDDTAVVDLPGERSDLVKVVGKEDVEAETYSTSDIVLPLPGSRVIYPSNDVAEIFHDLAKKDGISLTESIHGVKEFSITSMTGGYRRVFQKPIDFEWELLTYTDSNKPLAETDLDRITMEKPVDKVGSAEETESDSNQPESCETDLKDSEQTQLALKMALTLPSSCYATMAIRELLKTSTSVAYHKTLN